Bioinformatics AI Researcher (Generative & Agentic AI)

Description

• We are a team of highly experienced and collaborative bioinformatics scientists and we are seeking a qualified contractor to help us evaluate and develop generative AI and agentic AI approaches for healthcare and computational biology applications.
• Your work will involve research and development of generative AI and agentic AI based methods for multiple bioinformatics domains, including next-generation sequencing (NGS), precision medicine and related biological data workflows.
• Working at the intersection of state-of-the-art AI and bioinformatics will provide the opportunity to apply advanced AI methods to important real-world biomedical problems.

Job Duties/Responsibilities

• Review and assess the state of the art in generative AI and agentic AI with an emphasis on biological and healthcare applications.
• Assist in the design, development and evaluation of models and workflows involving generative AI and agentic AI for bioinformatics applications, including next-generation sequencing and precision medicine.
• Propose and assess strategies for training, benchmarking and improving these models and workflows.
• Implement methods and algorithms using Python and other relevant libraries and frameworks.
• Validate the accuracy, robustness and performance of the developed models, tools and workflows.
• Ensure that all work is well tested, documented and reproducible.
• Prepare clear technical summaries of methods, results and recommendations.
• Collaborate with scientists and engineers to support delivery of project milestones.

Qualification/Experience Required

• Enrollment in or recent completion of a Master’s degree or PhD in a quantitative field such as mathematics, physics, computer science, information science, bioinformatics or a related discipline.
• Proficiency in Python programming is required.
• Experience working in a Unix-like environment is required, including use of remote or high performance computing environments.
• Experience in applied machine learning, including traditional machine learning and deep learning using PyTorch or similar frameworks.
• Experience with experimental design, benchmarking and performance evaluation of machine learning models is desired.
• Background in statistics, probability theory and/or linear algebra is desired.
• Knowledge of generative AI, large language models and/or agentic AI methods is a plus.
• Knowledge of biological data analysis, bioinformatics and/or biology is a plus.

Mandatory Skills Required

• Enrollment in or recent completion of a Master’s degree or PhD in a quantitative field such as mathematics, physics, computer science, information science, bioinformatics or a related discipline.
• Proficiency in Python programming is required.
• Experience working in a Unix-like environment is required, including use of remote or high performance computing environments.
• Experience in applied machine learning, including traditional machine learning and deep learning using PyTorch or similar frameworks.

Nice to Have Skills Required

• Background in statistics, probability theory and/or linear algebra.
• Knowledge of generative AI, large language models and/or agentic AI methods.
• Knowledge and experience in analyzing biological data and/or biology.

Top Primary Goals for New Hire within 60days

• Complete a focused review of relevant literature and propose an initial technical plan for selected generative AI and agentic AI use cases in bioinformatics.
• Deliver an initial prototype or benchmark workflow in Python for at least one defined biological data application.
• Establish a reproducible development and evaluation setup, including code organization, documentation and initial performance results.